Publications for Resilient Landscapes Program
2024
Factsheet: How to Generate a Watershed Profile in EcoAtlas. 2024. (1.87 MB) .
Patterns in bird and pollinator occupancy and richness in a mosaic of urban office parks across scales and seasons. Ecology and Evolution. 2024;14(3). doi:https://doi.org/10.1002/ece3.10958.
Petaluma River Watershed Contemporary Riparian Condition Assessment. Richmond, CA: San Francisco Estuary Institute; 2024. (7.81 MB) .
2023
Translating Sediment Science Into Action: Documenting Beneficial Sediment Reuse. Richmond, CA: San Francisco Estuary Institute; 2023. (14.54 MB) .
Growing Resilience: Recommendations for Dune Management at North Ocean Beach. Richmond, CA: San Francisco Estuary Institute; 2023. (14.6 MB) (18.58 MB) .
Nature-based Solutions for Nutrient Removal.; 2023. (35.93 MB) (24.13 MB) (45.19 MB) (24.22 MB) .
Petaluma River Baylands Strategy. Prepared by San Francisco Estuary Institute, Sonoma Land Trust, Point Blue Conservation Science, Ducks Unlimited, and Sonoma Resource Conservation District. Funded by the Wildlife Conservation Board.; 2023. (12.81 MB) (12.16 MB) .
Stevens Creek Reservoir – Forecast Informed Reservoir Operation (FIRO) Phase One Report. ( ). Prepared for SCV Water District; 2023. (5.21 MB) .
Managing Open Space in Support of Net Zero: Carbon sequestration opportunities and tradeoffs in the Alameda Watershed. Richmond, CA: San Francisco Estuary Institute; 2023:120. (7.01 MB)
Where creeks meet baylands: Opportunities to re-establish freshwater and sediment delivery to the baylands of San Francisco Bay. Richmond, CA: San Francisco Estuary Institute; 2023. (24.29 MB) .
McCosker Creek Restoration and Public Access Project: Alder Creek Daylighting Additional Monitoring Elements - Final Report. Richmond, CA: San Francisco Estuary Institute; 2023. (8.07 MB)
Reconnecting Riverside with its River: Integrating Historical and Urban Ecology for a Healthier Future. Richmond, Ca: San Francisco Estuary Institute; 2023. (65.92 MB) (8.46 MB)
Regional Analysis of Potential Beneficial Use Locations. Richmond, CA: San Francisco Estuary Institute; 2023. (12.17 MB) .
Landscape Scenario Planning Tool User Guide v2.2.0. Richmond, Calif: San Francisco Estuary Institute; 2023. (5.27 MB) .
Baylands Resilience Framework for San Francisco Bay: Wildlife Support. Richmond, CA: San Francisco Estuary Institute; 2023. (10.03 MB) .
Lahontan Surface Water Ambient Monitoring Program’s 20-Year Water Quality Review and Program Recommendations. Richmond. CA: San Francisco Estuary Institute; 2023:137. (13.45 MB) .
Sycamore Alluvial Woodland Pilot Study Implementation Guidelines.; 2023. (13.23 MB) .
Restoration Plan for the Laguna de Santa Rosa. Richmond, CA: San Francisco Estuary Institute; 2023. (74.02 MB) (8.5 MB)
Sycamore Alluvial Woodland Restoration and Enhancement Suitability Study. Richmond, CA: San Francisco Estuary Institute; 2023. (83.26 MB) (10.1 MB) .
Adding Salinity Modifiers to CARI - Methods Brief. San Francisco Estuary Institute; 2023. (1.13 MB) .
Ecology for Health: Design Guidance for Fostering Human Health and Biodiversity in Cities. Richmond, CA: San Francisco Estuary Institute; 2023. (7.79 MB) (85.39 MB) .
2022
An assessment of future tidal marsh resilience in the San Francisco Estuary through modeling and quantifiable metrics of sustainability. Frontiers in Environmental Science. 2022;10. Available at: https://www.frontiersin.org/articles/10.3389/fenvs.2022.1039143/full. .
Shallow Groundwater Response to Sea-Level Rise: Alameda, Marin, San Francisco, and San Mateo Counties. Pathways Climate Institute and San Francisco Estuary Institute; 2022. doi:http://doi.org/10.13140/RG.2.2.16973.72164 . (18.5 MB)
Building Capacity of the California Wetland Program Plan to Protect and Restore Vernal Pools. Richmond. CA: San Francisco Estuary Institute; 2022:30. (2.07 MB) .
ELEVATION AND OPPORTUNITY IN THE DELTA: Restoring the right thing in the right place. Richmond, Ca: San Francisco Estuary Institute; 2022. (11.1 MB) (1.24 MB) .
Ecological Horticulture at the Presidio. ( ). Richmond, Ca: San Francisco Estuary Institute; 2022. (52.48 MB) (3.06 MB) .
Landscape Scenario Planning Tool User Guide v2.1.1.; 2022. (5.24 MB) .
Delta Wetland Futures: Tidal Marsh Resilience to Sea Level Rise. Richmond, CA: San Francisco Estuary Institute; 2022. (16.65 MB)
Delta Wetland Futures: Blue Carbon and Elevation Change. Richmond, CA: San Francisco Estuary Institute; 2022. (13.45 MB)
Adaptation Pathways: San Leandro Operational Landscape Unit. Richmond, CA: San Francisco Estuary Institute; 2022. (14.72 MB) .
Adaptation Planning for the Bay Point Operational Landscape Unit. Richmond, CA: San Francisco Estuary Institute; 2022. (14.35 MB) .
An Urban Forest Master Plan for East Palo Alto. Richmond, CA: San Francisco Estuary Institute; 2022. (65.81 MB) (10.26 MB) (3.72 MB) (79.11 KB) (91.1 KB) (2.69 MB) (95.58 KB) .
Landscape Scenario Planning Tool User Guide v2.0.; 2022. (4.84 MB) .
Leveraging Wetlands for a Better Climate Future: Incorporating Blue Carbon into California's Climate Planning. Richmond, CA: San Francisco Estuary Institute; 2022:31. (9.61 MB) .
RESILIENT STATEN ISLAND: Landscape Scenario Analysis Pilot Application. Richmond, Ca: San Francisco Estuary Institute; 2022. (8.44 MB) (1012.75 KB)
2021
Nature inequity and higher COVID-19 case rates in less green neighbourhoods in the United States. Nature Sustainability. 2021;4(10). doi:https://doi.org/10.1038/s41893-021-00781-9. .
On the human appropriation of wetland primary production. Science of the Total Environment. 2021;785. Available at: https://www.sciencedirect.com/science/article/pii/S0048969721021677.
Biophilia beyond the Building: Applying the Tools of Urban Biodiversity Planning to Create Biophilic Cities. Sustainability. 2021;13(5). (7.42 MB) .
What makes urban parks good for California quail? Evaluating park suitability, species persistence, and the potential for reintroduction into a large urban national park. Journal of Applied Ecology. 2021. (2.33 MB) .
The biological deserts fallacy: Cities in their landscapes contribute more than we think to regional biodiversity. BioScience. 2021;71(2). doi:https://doi.org/10.1093/biosci/biaa155. (781.56 KB) .
Sediment for Survival fact sheet. 2021. (4.06 MB) .
Ecotone levees and wildlife connectivity: A technical update to the Adaptation Atlas. Richmond, CA: San Francisco Estuary Institute; 2021. (47.42 MB) (14.82 MB) .
Green Stormwater Infrastructure Planning-level Analysis for Livermore-Amador Valley. Richmond, Calif.: San Francisco Estuary Institute; 2021. (20.75 MB) (12.19 MB) .
Aquatic, Wetland, and Riparian Habitat Mapping Committee -- Draft Charter.; 2021. (652.54 KB) .
Guidance for Restoration of Natural and Nature-Based Features in the Wetland-Upland Transition Zone. Richmond, CA: San Francisco Estuary Institute, California State Coastal Conservancy; 2021. (8.57 MB) .
Remote Sensing Recommendations for Tidal Wetland Indicators. Richmond. CA: San Francisco Estuary Institute; 2021:31. (412.32 KB) .
An Examination of the Benefits and Trade-offs of Visitation and Recreational Use of Public Open Space. Richmond, CA: San Francisco Estuary Institute; 2021. (9.33 MB) .
Towards a Coarse Sediment Strategy for the Bay Area. Richmond, CA: San Francisco Estuary Institute; 2021. (6.11 MB) (11.71 MB) .
Flood Control Channel Classification Scheme for the San Francisco Bay Region. ( ). Richmond, CA: San Francisco Estuary Institute; 2021. (11.94 MB) .
Trees and Hydrology in Urban Landscapes. Richmond, CA: San Francisco Estuary Institute; 2021. (8.97 MB) (20.88 MB)
Sediment for Survival: A Strategy for the Resilience of Bay Wetlands in the Lower San Francisco Estuary. Richmond, CA: San Francisco Estuary Institute; 2021. (50.5 MB) (11.45 MB) (1007.15 KB) .
Coyote Creek Watershed Reassessment 2020: 10-Year Reassessment of the Ecological Condition of Streams Applying the California Rapid Assessment Method, Santa Clara County, California. Richmond. CA: San Francisco Estuary Institute; 2021:131. (59.63 MB) .
E-Bikes and Open Space: The Current State of Research and Management Recommendations. Richmond, CA: San Francisco Estuary Institute; 2021. (2.99 MB) .
Peninsula Watershed Historical Ecology Study. Richmond, Ca: San Francisco Estuary Institute; 2021. (204.95 MB) (21.97 MB)
2020
Sports and urban biodiversity. 2020. doi:https://doi.org/10.2305/IUCN.CH.2020.14.en. .
Wildlife Habitat and Water Quality Enhancement Opportunities at Castlewood Country Club. Richmond, CA: San Francisco Estuary Institute; 2020. (52.69 MB) (2.68 MB) .
Sonoma Creek Baylands Strategy. Prepared by Sonoma Land Trust, San Francisco Estuary Institute, Point Blue Conservation Science, Environmental Science Associates, Ducks Unlimited, U.S. Fish and Wildlife Service; 2020. (5.12 MB) (18.47 MB) .
New Life for Eroding Shorelines: Beach and Marsh Edge Change in the San Francisco Estuary.; 2020. (9.17 MB) (44.24 MB) (81.05 MB) .
Coyote Creek Watershed Reassessment 2020 Ambient Stream Condition Survey Design and Monitoring Plan: A Review of the Original 2010 Survey Design and Development of the 2020 Reassessment Strategy. ( ). Richmond. CA: San Francisco Estuary Institute; 2020:18. (1.7 MB) .
Delta Landscapes Primary Production: Past, Present, Future. Richmond, CA: San Francisco Estuary Institute; 2020. (9.73 MB) (23.17 MB) (694.54 KB)
Livestock grazing and its effects on ecosystem structure, processes, and conservation. Richmond, CA: San Francisco Estuary Institute; 2020. (1.75 MB) .
Integrating Planning with Nature: Building climate resilience across the urban-to-rural gradient.; 2020. (6.35 MB) (88.2 MB) .
Special Study on Bulk Density. Richmond, CA: San Francisco Estuary Institute; 2020:43. (4.06 MB) .
Restoration Vision for the Laguna de Santa Rosa. Richmond, CA: SFEI; 2020. (101.3 MB) (58.17 MB)
Santa Clara County Five Watersheds Assessment: A Synthesis of Ecological Data Collection and Analysis Conducted by Valley Water. ( ). Richmond. CA: San Francisco Estuary Institute; 2020:71. (6.25 MB) .
Delta Landscapes Scenario Planning Tool User Guide. Version 1.0.0. Richmond, CA: SFEI; 2020. Available at: https://www.sfei.org/projects/delta-landscapes-scenario-planning-tool. (2.88 MB) .
Moffett Park Specific Plan Urban Ecology Technical Report.; 2020. (3.31 MB) .
Re-Oaking North Bay. Richmond, CA: San Francisco Estuary Institute; 2020. (20.51 MB) (1.83 MB) .
2019
Chinook Salmon Habitat Quantification Tool: User Guide (Version 1.0). Prepared for American Rivers. Funded by the Natural Resources Conservation Service Conservation Innovation Grant (#69-3A75-17-40), Water Foundation and Environmental Defense Fund. A report of SFEI-ASC’s Resilient Landscapes Program. 2019. (5.78 MB) (31.36 MB)
Sycamore Alluvial Woodland Presence and Distribution. 2019. (6.2 MB)
Prioritizing Candidate Green Infrastructure Sites within the City of Ukiah: A Demonstration of the Site Locator Tool of GreenPlan-IT. Report prepared for the City of Ukiah Department of Public Works under Supplemental Environmental Project # R1-018-0024. Richmond. CA: San Francisco Estuary Institute; 2019. (1.62 MB) .
San Francisco Bay Shoreline Adaptation Atlas: Working with Nature to Plan for Sea Level Rise Using Operational Landscape Units. Richmond, CA: SFEI & SPUR; 2019:255. doi:10.13140/RG.2.2.22416.46083. (259.64 MB) (84.6 MB) (20.93 MB) .
West Valley Watershed Assessment 2018: Baseline Ecological Condition Assessment of Southwest San Francisco Bay Creeks in Santa Clara County; Calabazas, San Tomas Aquino, Saratoga, Sunnyvale East and West. ( ). Richmond: San Francisco Estuary Institute; 2019. (5.02 MB) .
Making Nature's City. Richmond, CA: San Francisco Estuary Institute; 2019. (13.03 MB) (10.41 MB) (33.4 MB)
Urban Ecological Planning Guide for Santa Clara Valley. Richmond, CA: San Francisco Estuary Institute; 2019. (42.6 MB) .
2018
Building Ecological Resilience in Highly Modified Landscapes. 2018. doi:https://doi.org/10.1093/biosci/biy117. (4.93 MB)
Sediment Supply to San Francisco Bay. Richmond, CA: San Francisco Estuary Institute ; 2018. (1.74 MB)
Petaluma Valley Historical Hydrology and Ecology Study. Richmond, CA: San Francisco Estuary Institute; 2018. (121.7 MB) (43.68 MB) .
North Bay Mercury Biosentinel Project: 2016 - 2017.; 2018. (1.59 MB) .
Sycamore Alluvial Woodland Planting Guide.; 2018. (1.22 MB)
Resilient Landscape Vision for Upper Penitencia Creek. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2018. (67.6 MB) (11.75 MB)
Resilient Landscape Vision for the Calabazas Creek, San Tomas Aquino Creek, and Pond A8 Area: Bayland-Creek Reconnection Opportunities. Richmond, CA: San Francisco Estuary Institute-Aquatic Science Center; 2018:40. (68.63 MB) (20.14 MB) .
2017
Sycamore Alluvial Woodland: Habitat Mapping and Regeneration Study.; 2017. (53.95 MB) (21.31 MB)
Applied Aquatic Science: A Business Plan for EcoAtlas. Richmond, CA: San Francisco Estuary Institue; 2017. (1.69 MB) (323.4 KB) (214.45 KB) .
Changing Channels: Regional Information for Developing Multi-benefit Flood Control Channels at the Bay Interface. Richmond, CA: San Francisco Estuary Institute; 2017. (62.69 MB) (23.02 MB)
Delta Landscapes: A Delta Renewed User Guide.; 2017. (28.86 MB) .
MS4 2009 Permit Monitoring Results (2010-2015) Summary of Sonoma County Water Agency’s Data for two Sites in Santa Rosa Creek. Richmond. CA: San Francisco Estuary Institute; 2017:35. (1.43 MB) .
Demonstration of a Watershed Approach to Wetland Restoration Planning for Load Reductions: A Pilot Demonstration Project Using GreenPlan-IT in the Santa Rosa Plain, Sonoma County, California. Richmond. CA: San Francisco Estuary Institute; 2017. (761.48 KB) (420.02 KB) (1.29 MB) (1.67 MB) (2.09 MB) .
Lower Peninsula Watershed Condition Assessment 2016: Southwest San Francisco Bay, Santa Clara County, San Francisquito to Stevens Creeks. Technical memorandum prepared for the Santa Clara Valley Water District. ( ). Richmond: San Francisco Estuary Institute; 2017:53. (5.17 MB) .
Resilient By Design Briefing Book.; 2017. Available at: http://www.resilientbayarea.org/briefing-book/. (13.8 MB)
Historical Ecology and Landscape Change in the Central Laguna de Santa Rosa. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2017. (94.51 MB) (39.07 MB) .
Tijuana River Valley Historical Ecology Investigation. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center ; 2017:230. (232.2 MB) (73.63 MB)
Delta Landscapes Executive Summary.; 2017. (23.99 MB) .
A Watershed Approach to Restoration and Mitigation Planning, Monitoring, and Assessment Based on the Wetland and Riparian Area Monitoring Plan (WRAMP): Addendum to the Upper Pajaro River Watershed Assessment 2015. Richmond. CA: San Francisco Estuary Institute; 2017:30. (2 MB) .
Re-Oaking Silicon Valley: Building Vibrant Cities with Nature. Richmond, CA: San Francisco Estuary Institute; 2017. (65.64 MB) (31.88 MB) .
2016
Estuaries: Life on the edge. In: Ecosystems of California. Ecosystems of California. Berkeley, CA: University of California Press; 2016:359-388.
From past patterns to future potential: using historical ecology to inform river restoration on an intermittent California river. Landscape Ecology. 2016;31(3):20. doi:http://dx.doi.org/10.1007/s10980-015-0264-7. .
Primary Production in the Delta: Then and Now. San Francisco Estuary and Watershed Science. 2016;14(3). (864.19 KB)
Depressional wetland habitat development curve.; 2016. (451.13 KB) .
San Francisco Bay Shore Inventory: Mapping for Sea Level Rise Planning. Richmond, CA: San Francisco Estuary Institute; 2016. (20.33 MB)
San Francisquito Creek Baylands: Landscape Change Metrics Analysis. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2016:12. (6.19 MB) .
Relationship between wetland size and CRAM condition scores for depressional wetlands.; 2016. (652.08 KB) .
CRAM Fieldwork 2015 to Support Caltrans Project Tasks 2 & 3.; 2016. (716.68 KB) .
Lower Peninsula Watershed Condition Assessment 2016. Technical memorandum prepared for the Santa Clara Valley Water District - Priority D5 Project. Richmond, CA: San Francisco Estuary Institute; 2016:49. (4.36 MB) .
Relationship between wetland condition, stress, and buffer.; 2016. (15.06 MB) .
Framework to coordinate water quality improvement and wildlife habitat conservation to protect California streams, wetlands, and riparian areas. Richmond, CA: San Francisco Estuary Institute; 2016:89. (6.62 MB) .
Resilient Landscape Vision for Lower Walnut Creek: Baseline Information and Management Strategies. Richmond, CA: San Francisco Estuary Institute-Aquatic Science Center; 2016. (17.42 MB) (44.8 MB) .
A Delta Renewed: A Guide to Science-Based Ecological Restoration in the Sacramento-San Joaquin Delta. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2016. (121.28 MB) (17.67 MB)
An Introduction to EcoAtlas: Applied Aquatic Science. Richmond, CA: San Francisco Estuary Institute; 2016:16 pages. (5.84 MB) .
Upper Pajaro River Watershed Condition Assessment 2015. Technical memorandum prepared for the Santa Clara Valley Water District - Priority D5 Project. Richmond, CA: San Francisco Estuary Institute; 2016:60. (6.46 MB) .
2015
Functional Flows in Modified Riverscapes: Hydrographs, Habitats and Opportunities. BioScience. 2015. doi:10.1093/biosci/biv102.
Historical ecology and landscape change in the Sacramento - San Joaquin Delta. HydroLink. 2015;1. Available at: https://www.iahr.org/site/cms/newsarticle.asp?chapter=96&nid=643. .
The Tijuana River Valley: An Ecological Look into the Past. 2015. (49.38 MB) .
Novato Creek Baylands Historical Ecology Study. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2015. (27.13 MB) .
Landscape Resilience Framework: Operationalizing Ecological Resilience at the Landscape Scale. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2015. Available at: http://resilientsv.sfei.org/. (5.18 MB) .
Mt. Wanda Historical Ecology Investigation. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2015:51. (20.92 MB) (57.9 MB) .
Vision for a Resilient Silicon Valley Landscape.; 2015. (21.78 MB) .
Riparian Zone Estimation Tool Hydrologic Connectivity Module: Documentation and Validation of Selected Methodology. 745: San Francisco Estuary Institute; 2015. (3.15 MB) .
RipZET: The Riparian Zone Estimation Tool version 2.0. Richmond, CA: San Francisco Estuary Institute; 2015. (5.11 MB) .
Shifting Shores: Marsh Expansion and Retreat in San Pablo Bay.; 2015. (93.2 MB) (31.73 MB) .
Decentralized Wastewater Discharges and Multiple Benefit Natural Infrastructure: Preliminary Analysis and Next Steps (Final Project Report). East Bay Dischargers Authority ; 2015. (7.78 MB)
2014
What is Flood Control 2.0 (Podcast). 2014. Available at: http://www.yourwetlands.org/podcasts.php. (2.67 MB) .
EcoAtlas and CRAM Factsheet. 2014. (26.19 MB) .
Futures Past: Exploring California Landscapes with SFEI. Boom: A Journal of California. 2014;4(3):24. Available at: http://www.boomcalifornia.com/2014/09/futures-past. (6.67 MB) .
Futures Past Exploring California landscapes with the San Francisco Estuary Institute. Boom: The Journal of California . 2014;4(3):4-27. .
Delta Landscape Metrics: Creating a Spatial Framework to Inform Restoration Planning. 2014. Available at: http://sfei.org/projects/delta-landscapes-project. (8.36 MB) .
Santa Rosa Plain Wetlands Profile: A Demonstration of the CaliforniaWetland and Riparian Area Monitoring Plan. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014:46. (3.03 MB) .
Historical Changes in Channel Alignment along Lower Laguna de Santa Rosa and Mark West Creek. Richmond, CA: SFEI; 2014. (9.78 MB)
Wetlands of the Southern California Coast: Historical Extent and Change Over Time. Costa Mesa, Richmond, Northridge: Southern California Coastal watershed Research Project (SCCWRP), San Francisco Estuary Institute (SFEI), CSU Northridge Center for Geographical Studies; 2014. Available at: http://www.sfei.org/projects/SoCalTSheets_2. (5.96 MB)
A Delta Transformed: Ecological Functions, Spatial Metrics, and Landscape Change in the Sacramento-San Joaquin Delta. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014. Available at: http://sfei.org/projects/delta-landscapes-project. (58.56 MB) (11.76 MB) .
Northern San Diego County Lagoons Historical Ecology Investigation. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014:215. Available at: http://www.sfei.org/HE_San_Diego_Lagoons. (305.02 MB) (50.9 MB)
Landscape Scale Management Strategies for Arroyo Mocho and Arroyo Las Positas: Process-Based Approaches for Dynamic, Multi-Benefit Urban Channels. Richmond, CA: San Francisco Estuary Institute; 2014. (45.32 MB) .
Initial Protocol to Identify and Delineate the Head of Tide Zone in San Francisco Bay Tributaries. Richmond, CA: San Francisco Estuary Institute; 2014. Available at: http://www.sfei.org/projects/head-tide. (8.39 MB) .
North Bay Mercury Biosentinel Project (December 2014 Report). Richmond, CA: San Francisco Estuary Institute; 2014. (2.88 MB) .
Creating Landscape Profiles of Aquatic Resource Abundance, Diversity and Condition. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014:21. (651.67 KB) .
2013
RipZET Python 3x User's Manual v1.0. 2013. (2.25 MB) .
Alameda Creek Watershed Historical Ecology Study. Richmond, CA: San Francisco Estuary Institute; 2013. Available at: http://www.sfei.org/projects/AlamedaCreekHE. (335.05 MB) (163.08 MB)
Regional Curves of Hydraulic Geometry for Wadeable Streams In Marin and Sonoma Counties, San Francisco Bay Area. Watershed Sciences Berkeley and Marin County Flood Control District; 2013. (2.85 MB) .
Riparian Zone Estimation Tool: Hydrologic Connectivity Module Field Plan. Richmond, CA: San Francisco Estuary Institute; 2013. (5.1 MB) .
Landscape Patterns and Processes of the McCormack-Williamson Tract and Surrounding Area: A framework for restoring a resilient and functional landscape. Richmond, CA: SFEI-ASC; 2013. Available at: http://www.sfei.org/projects/delta-mccormack-williamson-tract. (21.34 MB) .
Statistical Design, Analysis, and Graphics for the Guadalupe River Watershed Assessment 2012. Richmond, CA: San Francisco Estuary Institute; 2013. (4.88 MB) .
Exploring the Traditional Use of Fire in the Coastal Mountains of Central California. Joint Fire Science Program; 2013. Available at: https://www.firescience.gov/JFSP_advanced_search_results_detail.cfm?jdbid=%24%26Z%3B%3BV%40%20%20%0A. (2.37 MB) .
An Assessment of the South Bay Historical Tidal-Terrestrial Transition Zone. Richmond, CA: San Francisco Estuary Institute; 2013. Available at: http://www.sfei.org/TZone_SouthSFBay. (7.87 MB) .
2012
Napa Valley Historical Ecology Atlas: Exploring a Hidden Landscape of Transformation and Resilience. Berkeley: UC Press; 2012:223. Available at: http://www.sfei.org/projects/napa-valley-historical-ecology-atlas.
Delta Historical Ecology GIS Data. 2012. Available at: http://www.sfei.org/DeltaHEStudy. (10.88 MB) .
Watching Our Watersheds: Santa Clara Valley Past. 2012:Google Earth KMZ files: Santa Clara Valley historical points of interest, stream courses and habitats. Available at: http://www.valleywater.org/WOW.aspx. (10.61 MB) .
Developing Tools for Landscape-Scale Restoration in the Delta. 2012. (4.59 MB)
Historical Ecology of the McCormack-Williamson Tract: A Landscape Framework for Restoration. Richmond, CA: Aquatic Science Center / San Francisco Estuary; 2012. .
Sacramento-San Joaquin Delta Historical Ecology Investigation: Exploring Pattern and Process. Richmond: SFEI; 2012. Available at: http://www.sfei.org/DeltaHEStudy. (252.87 MB) (135.09 MB) (44.2 MB) .
Upper Penitencia Creek Historical Ecology Assessment. Richmond, CA: SFEI; 2012. Available at: http://www.sfei.org/UpperPen_HE. (16.48 MB) .
2011
Oak Landscapes in the Recent Past. In: Oaks in the Urban Landscape: Selection, Care, and Preservation. Oaks in the Urban Landscape: Selection, Care, and Preservation. Richmond, CA: University of California Agriculture and Natural Resources; 2011. .
Contra Costa County 1939 Aerial Photomosaic. 2011:GIS layer containing orthorectified historical aerial imagery of Contra Costa County from 1939. Available at: http://oskicat.berkeley.edu/record=b18637538~S1. .
Ventura Historical Ecology Study GIS data. 2011. Available at: http://www.sfei.org/projects/VenturaHE. (47.1 KB) (2.42 MB) .
East Contra Costa Historical Ecology Study GIS data. 2011:GIS data produced for the East Contra Costa County Historical Ecology Study. Available at: http://www.sfei.org/HEEastContraCosta. (5.37 MB) (3.1 MB) .
Santa Clara Valley Historical Ecology GIS Data. 2011. Available at: http://www.sfei.org/projects/santa-clara-valley-historical-ecology-gis. (15.59 MB) (59.08 KB) .
Historical Ecology of Alameda Creek: Niles Cone to Tidal Marsh. 2011. (20.32 MB) .
Habitat Characteristics of Past Delta Landscapes: Knowledge for Improving Future Ecosystem Resilience. 2011. Available at: http://www.sfei.org/DeltaHEStudy. (8.53 MB) .
East Contra Costa Historical Ecology Study. Oakland: SFEI; 2011. Available at: http://www.sfei.org/HEEastContraCosta. (17.71 MB) (123.69 MB) (149.82 MB) (193.36 MB)
Historical Ecology of the lower Santa Clara River, Ventura River, and Oxnard Plain: an analysis of terrestrial, riverine, and coastal habitats. Oakland: SFEI; 2011. Available at: http://www.sfei.org/projects/VenturaHE. (17.09 MB) (201.86 MB)
Bay Area Aquatic Resources Inventory (BAARI) .; 2011:79. (41.31 MB) .
Ecological Monitoring & Assessment Framework: Stream Ecosystem Condition Profile: Coyote Creek Watershed . Oakland, CA: San Francisco Estuary Institute; 2011:109. (3.83 MB) (1.88 MB) .
Bioretention Monitoring at the Daly City Library (Case Study Technical Report). Oakland, CA: San Francisco Estuary Institute; 2011. (14.26 MB)
Historical Wetlands of the Southern California Coast: An Atlas of US Coast Survey T-sheets, 1851-1889. Oakland: SFEI; 2011. Available at: http://www.sfei.org/projects/SoCalTSheets. (202 MB) (196.79 MB) (5.42 MB) (4.95 MB) .
2010
Shifting Baselines in a California Oak Savanna: Nineteenth Century Data to Inform Restoration Scenarios. Restoration Ecology. 2010;19(101):88-101. doi:10.1111/j.1526-100X.2009.00633.x. .
Water Quality in South San Francisco Bay, California: Current Condition and Potential Issues for the South Bay Salt Pond Restoration Project. Reviews of Environmental Contamination and Toxicology. 2010;206:115-147. doi:10.1007/978-1-4419-6260-7_6. (880.04 KB) .
Historical Ecology of the Delta: Habitat characteristics of a fluvial-tidal landscape. 2010. Available at: http://www.sfei.org/DeltaHEStudy. (1.46 MB) .
The Historical Yolo Basin Landscape: What parts make the whole?. 2010. Available at: http://www.sfei.org/DeltaHEStudy. (4.92 MB) .
Historical Delta Landscapes: Conceptual models for building a diverse and resilient future. 2010. Available at: http://www.sfei.org/DeltaHEStudy. (5.17 MB) .
The Historical Ecology of Alameda Creek: recent findings. 2010. (16.52 MB) .
Historical Vegetation and Drainage Patterns of Western Santa Clara Valley: A technical memorandum describing landscape ecology in Lower Peninsula, West Valley, and Guadalupe Watershed Management Areas. Oakland: SFEI; 2010. Available at: http://www.sfei.org/scvheproject. (43.77 MB) (1.29 MB) .
2009
Mercury Concentrations and Loads in a Large River System Tributary to San Francisco Bay, California, USA. Environmental Toxicology and Chemistry. 2009. (725.12 KB)
Historical Ecology of the California Delta: Emerging Concepts of a Complex and Dynamic System. 2009. Available at: http://www.sfei.org/DeltaHEStudy. (1.62 MB) .
Bay Area Base Map of Aquatic Habitats. 2009. (84.32 MB) .
California’s Statewide Survey Of Tidal Wetland Condition. 2009. (1.49 MB)
Green Infill for Clean Stormwater (Poster). 2009. (12.67 MB) .
Summary Report: Green Sturgeon, Longfin Smelt, and Dredging Operations in the San Francisco Estuary. Oakland, Ca: San Francisco Estuary Institute; 2009. (4.1 MB) .
WRMP Factsheet — Wetland and Riparian Base Map. Oakland, Ca: San Francisco Estuary Institute; 2009. (1.25 MB) .
Watershed Specific and Regional Scale Suspended Sediment Load Estimates for Bay Area Small Tributaries. Oakland, Ca; 2009. (983.2 KB) .
Sustainable Cotton Project. Oakland, Ca: San Francisco Estuary Institute; 2009. (950.03 KB) .
Concentrations and Loads of Trace Contaminants in the Zone 4 Line A Small Tributary, Hayward, California: Water Year 2007. Oakland,Ca: San Francisco Estuary Institute; 2009. (6.77 MB) .
Historical Ecology Reconnaissance for the Lower Salinas River. Richmond: San Francisco Estuary Institute; 2009:32. Available at: http://www.sfei.org/projects/lower-salinas-river-historical-ecology-reconnaissance. (44 MB) .
Dry Creek Watershed Sediment Source Reconnaissance Technical Memorandum. Oakland,Ca: San Francisco Estuary Institute; 2009. (3.06 MB) (27.1 MB)
Going Organic Project. Oakland, Ca: San Francisco Estuary Institute; 2009. (3.09 MB)
The Historical Ecology of Alameda Creek: Introductory Brochure.; 2009. (2.88 MB) .
Historical Ecology of Lower San Francisquito Creek Phase 1. Oakland, Ca: San Francisco Estuary Institute; 2009. (3.99 MB) .
California Wetland and Riparian Area Protection Policy. Technical Advisory Team. Technical Memorandum No. 1: Technical Advisory Team. Oakland, CA: SFEI; 2009. (281.31 KB) .
2008
California Rapid Assessment Method (CRAM) Fact Sheet, Level 2, State version. 2008:2 pages. (390.99 KB) .
California Rapid Assessment Method (CRAM) Fact Sheet, Level 2, State version. 2008:2 pages. (390.99 KB) .
Alameda Creek Sediment Forum. 2008. Available at: alamedacreek. .
Napa Watershed Symposium. 2008. .
Review of sediment gauging studies in Alameda Creek Watershed. San Francisco Estuary Institute; 2008.
Spatiotemporal variation of turbidity in Alameda Creek and selected tributaries: August thru December 2007. San Francisco Estuary Institute; 2008. (16.66 MB)
South Santa Clara Valley Historical Ecology Study, including Soap Lake, the Upper Pajaro River, and Llagas, Uvas-Carnadero, and Pacheco Creeks.; 2008. Available at: http://www.sfei.org/SouthStaClaraValleyHEStudy. (26.39 MB) (6.81 MB) (14.42 MB) (20.34 MB) (51.26 MB) (42.1 MB) (33.12 MB) (63.69 MB)
Wetland Tracker Factsheet, Bay Area, Level 1: Landscpae Assessment. SFEI; 2008:2, front and back. (330.46 KB) .
An Introduction to the Historical Ecology of the Watsonville Sloughs: a Tool for the Critical Coastal Area Action Plan. San Francisco Estuary Institute; 2008. (1.32 MB) (16.53 MB) .
An Introduction to the Historical Ecology of the Sonoma Creek Watershed: a Tool for the Critical Coastal Area Action Plan. San Francisco Estuary Institute; 2008. (20.83 MB) .
CMARP Phase III Technical Support: Highlighting Monitoring Activities and Recommendations for Addressing Shortfalls and Improving Monitoring Coordination in the Delta-Suisun Bay Planning Area. Department of Fish and Game, Central Valley Bay-Delta Branch, Ecosystem Restoration Program; 2008. .
The Historical Ecology of Napa Valley: An Introduction.; 2008. (33.68 MB) (5.01 MB) .
The Historical Ecology of Miller Creek. 2008. Available at: http://www.nbwatershed.org/millercreek/. .
2007
The Quarternary geography and biogeography of tidal saltmarshes. Bioscience. 2007;56:675-685. .
Native American Management and the Legacy of Working Landscapes in California. Rangelands. 2007. .
Historical landscape ecology of an urbanized California valley: wetlands and woodlands in the Santa Clara Valley. Landscape Ecology. 2007:103-120. (609.88 KB) .
Aligning Socio-Economic and Ecological Condition Valuation. 2007. (2.34 MB) .
Appendix 1: All Deliverables Submitted for the Critical Coastal Areas Program, Phase I. San Francisco Estuary Institute; 2007. Available at: node/1188. (14.83 MB) .
Critical Coastal Areas Program, Phase I Final Report. San Francisco Estuary Institute; 2007. Available at: node/1188. (10.77 MB) .
East Contra Costa County Historical Ecology Study: Introductory Brochure.; 2007. (8.81 MB)
Ecology, Assemblage Structure, Distribution, and Status of Fishes in Streams Tributary to the San Francisco Estuary, California. San Francisco Estuary Institute and the EPA; 2007:194. Available at: http://www.sfei.org/leidy_No530/index.html. (1.4 MB) (12.83 MB) (20.17 MB) .
Project Assessment and Evaluation.; 2007. .
CRAM Evaluation of Wetland Conditions. Elk Grove, California; 2007:15. (5.29 MB) .
The Historical Ecology of Contra Costa County: An Illustrated Preview and Guide.; 2007. (8.81 MB) .
Stream Inventory Report for La Honda Creek: Prepared for the Midpeninsula Regional Open Space District. San Francisco Estuary Institute; 2007. (29.72 MB) .
2006
Evaluation of water hyacinth survival and growth in the Sacramento Delta, California following cutting. J. of Aquatic Plant Management. 2006. (781.42 KB)
Trophic adaptations in sparrows and other vertebrates of tidal marshes. Studies in Avian Biology. 2006. .
Comparison of Methods to Map California Riparian Areas. 2006. (13.1 MB) .
Second Annual Report Montezuma Wetlands Restoration Project Technical Review Team.; 2006. (57.39 MB) .
Review of methods to reduce urban stormwater loads. Oakland: San Francisco Estuary Institute; 2006:150xx. (6.43 MB) .
Pinole Creek Sediment Source Assessment: Pavon Creeks Sub-basin. San Francisco Estuary Institute; 2006:67. (51.71 MB) (25.63 MB) .
Concentrations and Loads of Mercury, PCBs and PBDEs in the Lower Guadalupe River, San Jose, California: Water Years 2003, 2004, and 2005. Oakland: San Francisco Estuary Institute; 2006. (11.98 MB) .
Coyote Creek Watershed Historical Ecology Study: Historical Conditions and Landscape Change in the Eastern Santa Clara Valley, California. San Francisco Estuary Institute; 2006. Available at: coyotecreek. (188.33 MB) (27.61 MB) (27.49 MB)
U.S. Coast Survey Maps of SFBay. 2006. Available at: http://maps.sfei.org/tSheets/viewer.htm. .
2005
Documenting Local Landscape Change: The Bay Area Historical Ecology Project. In: The HISTORICAL ECOLOGY HANDBOOK: A Restorationist's Guide to Reference Ecosystems. The HISTORICAL ECOLOGY HANDBOOK: A Restorationist's Guide to Reference Ecosystems. Island Press; 2005. Available at: http://www.islandpress.org/books/detail.html/SKU/1-59726-033-9. .
A practical guide for the development of a wetland rapid assessment method: the California experience. J. of the American Water Resources Association. 2005. .
Baylands and Creeks of South San Francisco Bay. 2005. (8.17 MB) .
South Bay Salt Pond Restoration Project Interactive Map. 2005. (3.64 MB) .
The Wetland Project Tracker. 2005. (3.45 MB)
. San Francisco Estuary Institute; 2005.
State of the Estuary 2005 Conference Abstract.; 2005. (76.3 KB) .
A Watershed Monitoring Strategy for Napa County. Napa,: San Francisco Estuary Institute; 2005:34. (1.14 MB) .
Concentrations and loads of mercury, PCBs, and OC pesticides in the lower Guadalupe River, San Jose,California: Water Years 2003 and 2004. San Francisco Estuary Institute; 2005:80. (1.61 MB) .
Human influences on nitrogen and phosphorus concentrations in creek and river waters of the Napa and Sonoma watersheds, northern San Francisco Bay, California. Oakland: San Francisco Estuary Institute; 2005. (1.72 MB) .
Pinole Creek Watershed Sediment Source Assessment. A technical report of the Regional Watershed Program, San Francisco Estuary Institute (SFEI), Oakland, California. (report only -- no appendix). Oakland, CA: San Francisco Estuary Institute; 2005. (4.28 MB) .
T-Sheet User Guide: Application of the Historical U.S. Coast Survey Maps to Environmental Management in the San Francisco Bay Area. SF: San Francisco Estuary Institute; 2005:45. (8.6 MB) .
Trends in Suspended Sediment Input to the San Francisco Bay for Local Tributaries Watersheds. San Francisco Estuary Institute; 2005. (7.9 MB) .
Pinole Creek Watershed Sediment Source Assessment. A technical report of the Regional Watershed Program, San Francisco Estuary Institute (SFEI), Oakland, California. (appendix only). Oakland, CA: San Francisco Estuary Institute; 2005. (1.29 MB) .
Interpreting Historical Maps to Reconstruct Past Landscapes in the Santa Clara Valley.; 2005. (32.97 MB) (32.97 MB) .
2004
Summary of the MeHg Panels of the 2004 CalFed Science Conference. Prepared with the advice and review of the Panelists. CalFed Science Conference, 2004. 2004:2. (55.25 KB) .
Relative effects of fluvial processes and historical land use on channel morphology in three sub-basins, Napa River basin, California, USA. IAHS, International Association of Hydrological Sciences. 2004;288. (117.55 KB) .
Baylands Vegetation Mapping Protocol (Version 1.0). Oakland, CA: San Francisco Estuary Institute; 2004. (450.49 KB) .
Analysis of Reference Tidal Channel Plan Form for the Montezuma Wetlands Restoration Project. Oakland, CA: San Francisco Estuary Institute; 2004. (5.96 MB) .
Wetland Habitat Changes in the Rodeo Lagoon Watershed, Golden Gate National Recreation Area, Marin County, CA. Oakland, CA: San Francisco Estuary Institute; 2004. (13.65 MB) .
Fluvial Geomorphology, Hydrology, and Riparian Habitat of La Honda Creek Along the Hwy 84 Transportation Corridor, San Mateo County, California. San Francisco Estuary Institute /CA State Univ of Fresno; 2004. (4.27 MB) (84.28 KB) (157.74 KB) (156.77 KB) (5.18 MB) (9.62 MB) (4.68 MB) (218.87 KB) (3.38 MB) (88.2 KB) (71.37 KB) (19.65 MB) (5.32 MB) (159.61 KB) .
Ecological, Geomorphic, and Land Use History of Carneros Creek Watershed: A component of the watershed management plan for the Carneros Creek watershed, Napa County, California. Oakland: San Francisco Estuary Institute; 2004. (1.15 MB)
San Pedro Creek Watershed Sediment Source Analysis, Volume III: Tributary sediment source assessment. Oakland, CA: San Francisco Estuary Institute; 2004. (16.74 MB) .
The concentration and load of PCBs, OC pesticides, and mercury associated with suspended sediments in the lower Guadalupe River, San Jose, California. A Technical Report of the Regional Watershed Program. Oakland, CA: San Francisco Estuary Institute; 2004. (1.66 MB) .
Ecological, Geomorphic, and Land Use History of Sulphur Creek Watershed: A component of the watershed management plan for the Sulphur Creek watershed, Napa County, California. Oakland: San Francisco Estuary Institute; 2004. (12.87 MB)
First Annual Report of the Montezuma Wetlands Restoration Project Technical Review Team. Oakland, CA: San Francisco Estuary Institute; 2004. (4.56 MB) .
Once and Future Bay: Lessons from History for Revitalizing the Bay. 2004. (6.28 MB) .
2003
Regional Wetlands Monitoring in San Francisco Bay (Transcript). In: ; 2003. (5.93 KB) .
Bay Area Wetlands Ecosystem Goals Project: Bay Area Wetland Project Map. 2003. (5.93 KB) .
Regional Watershed Program. 2003. (137.72 KB)
South and Central Bay Wetlands Projects. 2003. (25.49 KB) .
California Rapid Assessment Method (CRAM) - Part 1. 2003. (18.12 MB) .
CRAM: Synopsis of first CRAM Core Team meeting. 2003:4. (13.6 KB) .
Coyote Hills Area Habitat Conceptual Planning for 2002-03. 2003. (5.85 KB) .
Universal Wetland Ecological Features (Graphic). 2003. (6.96 KB) .
Ambient Survey of Intertidal Ecological Health and Stressors. 2003. (1.22 MB) .
Sustaining Regional Partnerships for Conservation: Sharing the Future. 2003. (2.15 MB) .
Channel Geomorphology Assessment: A component of the watershed management plan for the Sulphur Creek watershed, Napa County, California. Oakland, CA: San Francisco Estuary Institute; 2003. (4.64 MB) .
A Geographic History of the San Lorenzo Creek Watershed: Landscape Patterns Underlying Human Activities (w / 8.5x11 or 11 x 17 map). Oakland, CA: San Francisco Estuary Institute; 2003. Available at: http://www.sfei.org/HEP/reports/SLor_geog_hist_final_w_11x17_map_2.pdfhttp://www.sfei.org/HEP/reports/SLor_geog_hist_final_w_8x11map_2.pdf. (8.84 MB) (9.57 MB) .
Draft Guidelines for Developing the CRAM Metrics. Oakland, CA: San Francisco Estuary Institute; 2003:2. (4.88 KB) .
California Rapid Assessment Method (CRAM) - Part 2. San Francisco Estuary Institute; 2003. (2.79 MB) .
Regional Wetlands Monitoring in San Francisco Bay (Abstract).; 2003. (5.93 KB) .
Channel Geomorphology Assessment: A component of the watershed management plan for the Carneros Creek watershed, Napa County, California. Oakland, CA: San Francisco Estuary Institute; 2003. (4.87 MB) .
DRAFT California Rapid Assessment (CRAM) Verification Approach. Oakland, CA: San Francisco Estuary Institute; 2003:p. 9. .
South Bay Updates Modern Baylands Habitat Coverage Bay Area EcoAtlas Information System. Oakland, CA: San Francisco Estuary Institute; 2003. .
2002
Freshwater inflow: Science, Policy, and Managment. Estuaries. 2002;25:1243-1245. .
Shell damage and salt marsh periwinkles (Littoraria irrorata Say) and resistance to future attacks by blue crabs (Callinectes sapidus Rathbun). American Malacological Bulletin. 2002;17:141-146. (423.12 KB) .
The National Hydrography Data Set: San Francisco Bay Area. 2002. (9.47 MB) .
Tidal Marsh Vegetation. 2002. (72.85 KB) .
River Otter Protocol. 2002. (58.68 KB) .
Statement of Need (Wetlands Science Program). 2002:1. .
Program Development for the Wetlands Science Program. 2002:1. (10.39 KB) .
Geographic Scope of the Wetlands Science Program. 2002:1. (6.38 KB) .
Sediment Protocols. 2002. (94.08 KB) .
Management Structure of the Wetlands Science Program. 2002:10. (33.86 KB) .
Major Technical Components of the Wetlands Science Program. 2002:6. (24.7 KB) .
Management Questions for the Wetlands Science Program. 2002:1. (9.04 KB) .
Red-Legged Frog Protocol. 2002. (399.23 KB) .
Sediment Contaminants. 2002. (172.72 KB) .
Sources, Pathways and Loadings Documents. 2002. (184.57 KB) (282.92 KB) (2.84 MB) (1.06 MB) (816.18 KB) (343.39 KB) (221.26 KB) (2.53 MB) (1.32 MB) (1.21 MB) (1.25 MB) (598.85 KB) .
Yuma Bat Protocol. 2002. (36.84 KB) .
Data Collection Protocol Yuma Bat (Myotis yumanensis). San Jose, CA: H.T Harvey & Associates; 2002:7. .
Data Collection Protocol Tidal Wetland Vegetation. San Francisco, CA: San Francisco State; 2002:13. .
Data Collection Protocol Distribution, Abundance, and Treatment of Non-indigenous Speicies of Cordgrass in the San Francisco Estuary. Oakland, CA: San Francisco Estuary Institute; 2002:44. (1.18 MB) .
Data Collection Protocol Survey Protocol for the California Red-Legged Frog (Rana aurora draytonii). Fremont, CA: Rana Resources; 2002:15. .
The Historical Geography and Biogeography of Tidal Salt Marshes (Abstract). San Francisco Estuary Institute; 2002. (5.66 KB) .
Data Collection Protocol Montioring River Otter (Lutra [=Lontra] canadensis). Oakland, CAStanislaus, CA: CA State University Stanislaus, U.S Forest Service, San Francisco Bay Regional Water Quality Control Board; 2002:11. .
California Rapid Assessment Method for Wetlands v. 1.0. San Francisco Estuary Institute; 2002:18. .
Mapping Urbanized and Rural Drainages in the Bay Area: A Tool for Improved Management of Stormwater Contaminants Derived from Small Tributaries. Oakland, CA: San Francisco Estuary Institute; 2002. (2.1 MB) .
Data Collection Protocol Sedimentation- Erosion Tables (SET's). San Francisco, CASan Rafael, CA: University of San Francisco, Wetlands and Water Resources; 2002. .
Estimation of Total Mercury Fluxes Entering San Francisco Bay from the Sacramento and San Joaquin River Watersheds (Technical Memo). Oakland, CA: San Francisco Estuary Institute; 2002. (1007.25 KB) .
Data Collection Protocols Surveying for the Salt Marsh Harvest Mouse [Reithrodontomys raviventris}, California Vole (Microtus califoricus) and other Small Mammals. Fremont, Ca San Jose, Ca: Rana Resources, San Jose State University; 2002:14. .
Napa River Sediment TMDL Baseline Study: Geomorphic Processes and Habitat form and function in Soda Creek. Oakland, CA: San Francisco Estuary Institute; 2002. (4.2 MB) .
Sonoma Valley Historical Ecology Project, Phase 1 Final Report. Sonoma County Water Agency and the SF Estuary Project.; 2002:8 pp. plus apps. (31.29 KB) .
Summary of Crissy Field Monitoring Elements. San Francisco Estuary Institute; 2002. Available at: http://www.sfei.org/wetlands/Current%20Projects/Crissy%20Field%20Monitoring%20Tec%7E000/2%20Summary%20of%20Crissy%20Fie%7E000.pdf. (9.75 KB) .
San Francisco Estuary Wetalnds Regional Monitoring Program Plan: Version 1, Framework and Protocols. Oakland, CA: San Francisco Estuary Institute; 2002:94. (1.11 MB) .
Monitoring the US West Coast: An Assessment of California’s Estuaries and the Pacific Ocean:Spatial Hierarchy and its Rationale. Oakland, CA: San Francisco Estuary Institute; 2002. (119.38 KB) .
Executive Summary 2002 (Wetlands Science Program). San Francisco Estuary Institute; 2002:4. (27.74 KB) .
Executive Summary: SFEI Component of the Integrated Regional Wetlands Monitoring Pilot Project. San Francisco Estuary Institute; 2002:2. (75.19 KB) .
Results of the Estuary Interface Pilot Study, 1996-1999, Final Report. (Technical Report of the Sources Pathways and Loading Work Group (SPLWG) of the San Francisco Estuary Regional Monitoring Program for Trace Substances (RMP)). Oakland, CA: San Francisco Estuary Institute; 2002. (1.66 MB) .
Measurement of sediment and contaminant loads from the Guadalupe River watershed: sampling and analysis plan. Oakland, CA: San Francisco Estuary Institute; 2002. (657.31 KB)
Mission Statement for the Wetlands Science Program. 2002:1. (4.31 KB) .
2001
Documenting Local Landscape Change: The Bay Area Historical Ecology Project. In: The Historical Ecology Handbook: A Restorationist's Guide to Reference Ecosystems. The Historical Ecology Handbook: A Restorationist's Guide to Reference Ecosystems. Washington D.C.: Island Press; 2001. .
Contaminant contributions from the Guadalupe River and Coyote Creek watersheds to the lower South San Francisco Bay. Abstracts of the 5th Biannual State of the Estuary Conference – San Francisco Estuary: Achievements, trends and the future. 2001. .
Building a regionally consistent base map for the Bay Area: The National Hydrography Data Set. Abstracts of the 5th Biannual State of the Estuary Conference – San Francisco Estuary: Achievements, trends and the future. 2001:pp 108. .
Influence of climate, geology, and humans on spatial and temporal variability in nutrient geochemistry in the sub-tropical Richmond River catchment, Australia. Marine and Freshwater Research. 2001;52:235-248. .
Program Strategy for the Wetlands Science Program. 2001. (25.54 KB) .
Introduction to Wetland Monitoring Protocols. 2001. (13.03 KB) .
Montezuma Wetlands Monitoring Project Technical Review Team (TRT) Charter. 2001. (24.56 KB) .
SFEI Wetlands Program Strategy. 2001:6. .
Sand. 2001. .
Resurvey. 2001. (857.15 KB) .
Wetlands Work at SFEI. 2001. (2.91 MB) .
Mosquito Landscapes - Part 2 (Transcript). 2001. (8.69 KB) .
Determining Loads and Trends in Small Tributaries. 2001. (77.09 KB)
In Search of a Lost Laguna. 2001. (938.36 KB) .
Coyote Hills Historic Baylands. 2001. (3.44 MB) .
Historic Drainage Patterns of the Alameda Watershed (Transcript). 2001. (821.71 KB) .
Basic Regional Spatial Analysis of Non - Indigenous Invasive Species (NIS) Spartina Invasions in the San Francisco Estuary. Richmond, Ca: San Francisco Estuary Institute; 2001. (429.92 KB) .
Restoration of the San Francisco Region: the Role of NGOs (Abstract). Richmond, CA: San Francisco, CA; 2001. (4.94 KB) .
Land Use Timeline for Crow Canyon and the San Lorenzo Creek Watershed. Alameda Countywide Clean Water Program; 2001:6 pp. (21.63 KB) .
Ohio Rapid Assessment Method for Wetlands v. 5.0 Users Manual and Scoring Forms. Ohio: State of Ohio Environmental Protection Agency; 2001:107. .
Bay Area Wetlands Regional Monitoring Program (Abstract, SOE 2001). Richmond, CA: San Francisco Estuary Institute; 2001. (6.46 KB) .
QAPP for environmental monitoring and assessment program West Coast Pilot 2002 Intertidal Assessment: California Intensification. Oakland, CA: San Francisco Estuary Institute; 2001. (489.07 KB) .
Will Knowing Tidal Elevation Help Explain Variations in Sediment Chemistry and Microbial Processes Among Sample Plots in Tidal Marshes?. San Francisco Estuary Institute; 2001:6. (47.14 KB) .
Wildcat Creek Watershed: A Scientific Study of Physical Processes and Land Use Effects. Richmond, CA: San Francisco Estuary Institute; 2001. Available at: http://www.sfei.org/wildcatcreeklandscapehistory. (31.51 MB) (98.29 MB) (2.11 MB) (16.39 MB) (107 MB) (3.19 MB) (14.02 MB) .
Sediment loads transported from the Delta: Implications for management of pollutants of concern. San Francisco Estuary Institute; 2001. (1.3 MB)
Resurrection (Article in New Scientist). 2001. (314.5 KB) .
2000
Mercury and tidal wetland restoration. In: Chapter 6 in Brown, L. (ed.). DRAFT CALFED Whitepaper on: Ecological Processes in Tidal Wetlands of the Sacramento-San Joaquin Estuary and Their Implications for Proposed Restoration Efforts of the Ecosystem Restoration Program. Chapter 6 in Brown, L. (ed.). DRAFT CALFED Whitepaper on: Ecological Processes in Tidal Wetlands of the Sacramento-San Joaquin Estuary and Their Implications for Proposed Restoration Efforts of the Ecosystem Restoration Program.; 2000. .
Transport and retention of nitrogen and phosphorus in the sub-tropical Richmond River estuary, Australia - a budget approach. Biogeochemistry. 2000;50:241-278. .
Intra - and inter-annual export of nitrogen and phosphorus in the sub-tropical Richmond River catchment, Australia. Hydrological Processes. 2000;14:1787-1809. .
A framework for comprehensive, integrated, watershed monitoring in New York City. Environmental Monitoring and Assessment. 2000;62:147-167.
The Estuary Interface Pilot Study: 1998 Progress Report. San Francisco Estuary Institute; 2000. .
The Way It Was: Mythology, Memory, and Maps of the Early San Francisco Bay Area (Abstract for American Society for Environmental History Conference, March 2000). San Francisco Estuary Institute; 2000. (8.69 KB) .
Contaminant Loads from Stormwater to Coastal Waters in the San Francisco Bay Region: Comparison to Other Pathways and Recommended Approach for Future Evaluation. Richmond, CA: San Francisco Estuary Institute; 2000. (4.87 MB) (2.58 MB) .
1999
Seeing Time: A Historical Approach to Restoration. Ecological Restoration. 1999;17:251-2. .
Mosquito Landscapes - Part 1 (Transcript). 1999. (14.58 KB) .
Effects of the Goals Project (Transcript). 1999. (17.13 KB) .
Robert A. Leidy Fish Survey 1992-1998 Bay Area Stream Fishes.; 1999. (1.37 MB) .
Conceptual models of freshwater influences on tidal marsh form and function, with an historical perspective. City of San Jose, CA: Department of Environmental Services; 1999:237 pp. .
Baylands Ecosystem Habitat Goals Report.; 1999. (7.11 MB) .
Baylands Ecosystem Habitat Goals. U. S. Environmental Protection Agency, San Francisco, Calif./S.F. Bay Regional Water Quality Control Board, Oakland, Calif.; 1999:328. (7.11 MB) .
1998
The Baylands: Past, Present, and Change (Abstract). 1998. (6.46 KB) .
Uncertainty in Biodiversity Planning: Lessons from the Bay Area (Transcript). 1998. (21.2 KB) .
EcoAtlas Baylands Maps. 1998. Available at: ecoatlas. .
Bay Area Watersheds Science Approach. 1998. (330.72 KB) .
Mosquito Landscapes (Abstract). 1998. (4.48 KB) .
The Watershed and the Baylands (Transcript). 1998. (15.94 KB) .
Comments on the Intersection of Land, Water, and People (Transcript). 1998. (5.69 KB) .
A Bay Area Watersheds Science Approach (Abstract). 1998. (4.4 KB) .
Bay Area Wetlands Ecosystem Goals Project: Key Baylands Habitats. San Francisco Estuary Institute; 1998. (35.49 KB) .
Spatial Analysis of the Baylands Ecosystem.; 1998:120. .
Bay Area Wetlands Ecosystem Goals Project: Key Baylands Species. San Francisco Estuary Institute; 1998. (25.65 KB) .
BAYLANDS ECOSYSTEM HABITAT GOALS: REPORT ON THE PROCESS TO SET REGIONAL GOALS FOR WETLANDS RESTORATION IN THE SAN FRANCISCO BAY AREA. Richmond, CA: San Francisco Estuary Institute; 1998. (3.12 KB) .
Contamination of Tidal Wetlands. Richmond CA; 1998. .
Cartographic analysis of historical and modern baylands boundaries for Marin County, California. Marin County Community Develpment Agency; 1998:88 pp. .
Bay Area Wetlands Ecosystem Goals Project: Draft Functional Correspondence between Past and Present Key Habitats. San Francisco Estuary Institute; 1998. (23.63 KB) .
1997
Recovery strategies for the California clapper rail (Rallus longirostris obsoletus) in the heavily urbanized San Francisco estuarine ecosystem. Landscape and Urban Planning. 1997;38:229-243. .
Watershed Conference (Transcript). 1997. (9.82 KB) .
Sausal: Discovering the Early Bay Area Landscape. 1997;Jan. .
Red tide in Berkeley Marina raises concern for toxic blooms in Central Bay. 1997;11:11-13. Available at: http://www.sfei.org/bioinvasions/Reports/1998RedTide.pdf. (632.84 KB) .
Watershed Management in the Bay Area (Transcript). 1997. (20.09 KB) .
1996
What is a Tidal Marsh?. 1996:1. (8.99 KB) .
What are Data? (Transcript). 1996:17. (8.99 KB) .
Geography of Wetlands in the San Francisco Estuary (Transcript). 1996. (20.54 KB) .
1995
Bay Area Wetlands Ecosystem Goals Project: Focus Team Orientation Package. 1995. (60.58 KB) .
A Very Brief Overview on The Histories of Some Marin County Creeks (Transcript). 1995. (15.94 KB) .
Bay Area Wetlands Ecosystem Goals Project: Starting Considerations. 1995. (10.27 KB) .
Historical Evidence of Freshwater Effects on the Plan Form of Tidal Marshlands in the Golden Gate Estuary. Masters Thesis. 1995:130 pp. .
1994
Implementation Manual for the San Leandro Creek Watershed Awareness Program, 1993-1994. Richmond, Ca: San Francisco Estuary Institute; 1994:75. .
1987
Natural and artificial wetland ecosystems - ecological opportunities and limitations. In: Aquatic Plants for Water Treatment and Resource Recovery. Aquatic Plants for Water Treatment and Resource Recovery. Gainesville, FL: University of Florida; 1987. .